Publikationen

@ARTICLE{cabreraserrano2026inod1637735,
  author = {Cabrera-Serrano, A.J.~ and Carretero-Fernández, M.~ and Pérez-Rojo, B.~ and Ter Horst, R.~ and Cañadas-Garre, M.~ and Canhão, H.~ and Quartuccio, L.~ and Sorensen, S.B.~ and Glintborg, B.~ and Filipescu, I.~ and Pérez-Pampin, E.~ and Conesa-Zamora, P.~ and Swierkot, J.~ and den Broeder, A.A.~ and de Vita, S.~ and Brix Petersen, E.R.~ and Li, Y.~ and Coenen, M.J.H.~ and Bogunia-Kubik, K.~ and Andersen, V.~ and Fonseca, J.E.~ and Lund Hetland, M.~ and López Nevot, M.Á.~ and López-Medina, C.~ and Reyes-Zurita, F.J.~ and Netea, M.G.~ and Escudero, A.~ and Cáliz, R.~ and Collantes-Estévez, E.~ and Sánchez-Maldonado, J.M.~ and Sainz, J.~},
  title = {Identification of New Overlapping and Disease-Specific Genetic Risk Factors for Rheumatoid Arthritis and Radiographic Axial Spondyloarthritis: A Meta-Analysis of Three Large European Populations and Functional Characterization.},
  journal = {Frontiers in Immunology},
  year = {2026},
  volume = {17},
  pages = {1637735},
  issn = {1664-3224},
  doi = {10.3389/fimmu.2026.1637735},
  keywords = {Female;Humans;Male;Risk Factors;Europe;Quantitative Trait Loci;Alleles;*Polymorphism;Single Nucleotide;*Genetic Predisposition to Disease;rheumatoid arthritis;Cytokines/metabolism;genetic variants;*Arthritis;Rheumatoid/genetics;*Axial Spondyloarthritis/genetics/diagnostic imaging;ankylosing spondylitis;functional characterization;overlapping and disease-specific genetic markers}
}

@ARTICLE{buvat2026cmwr19,
  author = {Buvat, I.~ and Aarntzen, E.~ and Badawi, R.D.~ and Ballesta, A.~ and Bock, C.~ and Chuah, C.-N.~ and Fisher, J.~ and Graff, J.-P.~ and Ilan, Y.~ and Isambert, H.~ and Ivanov, P.C.~ and Izu, L.T.~ and Koenen, H.J.~ and Langevin, H.~ and Lewis, D.Y.~ and Liem, D.A.~ and Mackerodt, J.~ and Pires, M.~ and Sundar, L.K.~ and Tawakol, A.~ and Ter Horst, R.~ and van Cranenbroek, B.~ and Weigelin, B.~ and Cherry, S.R.~ and Beyer, T.~},
  title = {Cross-Disciplinary Methodologies for Whole-Person Research – Insights from EMPOWER2024.},
  journal = {npj Imaging},
  year = {2026},
  volume = {4},
  pages = {19},
  issn = {2948-197X},
  doi = {10.1038/s44303-026-00151-0}
}

@ARTICLE{cdossantos2026pvcs114807,
  author = {C. dos Santos, J.~ and Groenendijk, A.L.~ and Ruijten, S.D.E.~ and Knoll, R.~ and Vadaq, N.~ and Ter Horst, R.~ and Fok, E.T.~ and Witkowski, W.~ and Blaauw, M.J.T.~ and van Eekeren, L.E.~ and Vos, W.A.J.W.~ and Cleophas-Jacobs, M.~ and Reichl, S.~ and Otten, T.~ and Martens, J.H.A.~ and van der Meer, A.~ and Koninkx, H.~ and de Jonge, M.I.~ and Beyer, M.D.~ and van Lunzen, J.~ and Joosten, L.A.B.~ and Bock, C.~ and Rokx, C.~ and Verbon, A.~ and Vandekerckhove, L.~ and Aschenbrenner, A.C.~ and Schultze, J.L.~ and Matzaraki, V.~ and van der Ven, A.J.A.M.~ and Netea, M.G.~},
  title = {Persistent Viral Control Status Is Associated with Enhanced Innate Immune Responses in People with HIV-1.},
  journal = {iScience},
  year = {2026},
  volume = {29},
  number = {3},
  pages = {114807},
  doi = {10.1016/j.isci.2026.114807},
  url = {https://www.scopus.com/inward/record.uri?eid=2-s2.0-105030614301\&doi=10.1016%2fj.isci.2026.114807\&partnerID=40\&md5=cfd54c1c82c1297e5e133a27f65a11cd}
}

@ARTICLE{sidiropoulou2026lied110656,
  author = {Sidiropoulou, C.~ and Poulakou, G.~ and Kyriazopoulou, E.~ and Tasouli, E.~ and Giannitsioti, E.~ and Strikou, A.~ and Tsilika, M.~ and Christaki, E.~ and Rapti, V.~ and Evangelopoulou, V.~ and Rovina, N.~ and Iannotti, N.~ and Nicastri, E.~ and Taddei, E.~ and Florou, H.~ and Angheben, A.~ and Bassetti, M.~ and Dagna, L.~ and Torres, A.~ and Foutadakis, S.~ and Adamis, G.~ and Stylianakis, E.~ and Vatsellas, G.~ and Damoraki, G.~ and Efstratiou, L.~ and Damoulari, C.~ and Leventogiannis, K.~ and Laskaratos, A.~ and Koufargyris, P.~ and Charalampaki, N.~ and Chra, P.~ and Galanopoulou, A.~ and Thanos, D.~ and Panagopoulos, P.~ and Syrigos, K.~ and Ziogas, A.~ and Ter Horst, R.~ and van der Meer, J.W.M.~ and Iliopoulou, K.~ and Serino, F.S.~ and Pavlaki, M.~ and Del Vecchio, P.~ and Scorzolini, L.~ and Bandera, A.~ and Bakakos, A.~ and Sympardi, S.~ and Milionis, H.~ and Netea, M.G.~ and Giamarellos-Bourboulis, E.J.~},
  title = {Long-Term Immune and Epigenetic Dysregulation Following COVID-19.},
  journal = {Clinical Immunology},
  year = {2026},
  volume = {283},
  pages = {110656},
  issn = {1521-7035 1521-6616},
  doi = {10.1016/j.clim.2025.110656},
  keywords = {Adult;Female;Humans;Male;Aged;Middle Aged;Prospective Studies;Phenotype;Cytokines;*COVID-19/immunology/genetics;*Epigenesis;Genetic/immunology;*SARS-CoV-2/immunology;Cytokines/blood/immunology/genetics;IL-1;Immune dysregulation;Lung function tests;Phenotypes;Post-Acute COVID-19 Syndrome;Post-acute COVID-19 syndrome (PACS)}
}

@ARTICLE{cabreraserrano2025i4ag60766089,
  author = {Cabrera-Serrano, A.J.~ and Sánchez-Maldonado, J.M.~ and Rodríguez-Sevilla, J.J.~ and Reyes-Zurita, F.J.~ and Collado, R.~ and Puiggros, A.~ and Cornejo-Calvo, E.~ and García-Martín, P.~ and Ter Horst, R.~ and Benavente, Y.~ and Jerez, A.~ and Landi, S.~ and Espinet, B.~ and Maffei, R.~ and López-Nevot, M.Á.~ and Ramos-Campoy, S.~ and González-Olmedo, C.~ and Chen-Liang, T.-H.~ and Moreno, V.~ and Jannus, F.~ and Marcos-Gragera, R.~ and Carretero-Fernández, M.~ and Sampaio-Marques, B.~ and Gámez, I.~ and García-Álvarez, M.~ and Camp, N.J.~ and Dierssen-Sotos, T.~ and Kamaso, J.~ and Pérez, E.M.~ and Norman, A.D.~ and Luppi, M.~ and Li, Y.~ and Alcoceba, M.~ and Campa, D.~ and de San José, S.~ and Marasca, R.~ and Ludovico, P.~ and Clay-Gilmour, A.~ and Canzian, F.~ and Ibañez, M.~ and Netea, M.G.~ and McKay, J.~ and Casabonne, D.~ and Berndt, S.I.~ and Slager, S.L.~ and Sainz, J.~},
  title = {Identification of 4 Autophagy-Related Genetic Variants as Risk Factors for Chronic Lymphocytic Leukemia.},
  journal = {Blood Advances},
  year = {2025},
  volume = {9},
  number = {23},
  pages = {6076--6089},
  issn = {2473-9529},
  doi = {10.1182/bloodadvances.2025017345},
  url = {https://www.sciencedirect.com/science/article/pii/S2473952925005476}
}

@ARTICLE{teufel2025iian113758,
  author = {Teufel, L.U.~ and Matzaraki, V.~ and Folkman, L.~ and de Graaf, D.M.~ and Ter Horst, R.~ and Moorlag, S.J.C.F.M.~ and Dos Santos, J.C.~ and Mulders-Manders, C.M.~ and Krausgruber, T.~ and Dinarello, C.~ and Netea, M.G.~ and Joosten, L.A.B.~ and Arts, R.J.W.~},
  title = {Interleukin-38 Is a Negative Regulator of Trained Immunity—A Retrospective Multi-Omics Study.},
  journal = {iScience},
  year = {2025},
  volume = {28},
  number = {11},
  pages = {113758},
  issn = {2589-0042},
  doi = {10.1016/j.isci.2025.113758},
  keywords = {Immune response;Immunity;Omics}
}

@ARTICLE{helder2025bctiqiaf123,
  author = {Helder, L.S.~ and Groh, L.A.~ and Matzaraki, V.~ and Ter Horst, R.~ and Scheffer, G.J.~ and Joosten, L.A.B.~ and Netea, M.G.~ and Ferreira, A.V.~},
  title = {Bacillus Calmette-Guérin-Induced Trained Immunity Potentiates TH17 Responses in Vitro.},
  journal = {Journal of Leukocyte Biology},
  year = {2025},
  volume = {117},
  number = {9},
  pages = {qiaf123},
  issn = {1938-3673 0741-5400},
  doi = {10.1093/jleuko/qiaf123},
  keywords = {Humans;Cells;Cultured;T cells;vaccination;trained immunity;macrophages;BCG;Trained Immunity;*BCG Vaccine/immunology/pharmacology;*Macrophages/immunology;*Mycobacterium bovis/immunology;*Th17 Cells/immunology/cytology;Antigen Presentation;Coculture Techniques;Immunity;Innate;Interferon-gamma;Interleukin-17/biosynthesis;Lymphocyte Activation/immunology}
}

@ARTICLE{cabreraserrano2025agas1639825,
  author = {Cabrera-Serrano, A.J.~ and Ruiz-Durán, L.~ and Gutiérrez-Bautista, J.F.~ and Carretero-Fernández, M.~ and Ter Horst, R.~ and Li, Y.~ and Reyes-Zurita, F.J.~ and García-Verdejo, F.J.~ and Netea, M.G.~ and Sánchez-Rovira, P.~ and López-Nevot, M.Á.~ and Sampedro, A.~ and Sainz, J.~},
  title = {A Genome-Wide Association Study Identifies New Loci Associated with Response to SARS-CoV-2 mRNA-1273 Vaccine in a Cohort of Healthy Healthcare Workers.},
  journal = {Frontiers in Immunology},
  year = {2025},
  volume = {16},
  pages = {1639825},
  issn = {1664-3224},
  doi = {10.3389/fimmu.2025.1639825},
  keywords = {Adult;Female;Humans;Male;Middle Aged;Cohort Studies;GWAS;Polymorphism;Single Nucleotide;Genome-Wide Association Study;Vaccination;Genetic Loci;Health Personnel;Immunoglobulin G/blood/immunology;SARS-CoV-2;*SARS-CoV-2/immunology;*COVID-19 Vaccines/immunology;*COVID-19/prevention \& control/immunology/genetics;2019-nCoV Vaccine mRNA-1273/immunology;Antibodies;Viral/blood/immunology;circulating IgG levels;genetic variants;IgG decay;Spike Glycoprotein;Coronavirus/immunology}
}

@ARTICLE{zhang2025ugsi7134,
  author = {Zhang, Z.~ and Li, W.~ and Zhan, Q.~ and Aillaud, M.~ and Botey-Bataller, J.~ and Zoodsma, M.~ and Ter Horst, R.~ and Joosten, L.A.B.~ and Bock, C.~ and Schulte, L.N.~ and Xu, C.-J.~ and Netea, M.G.~ and Bonder, M.J.~ and Li, Y.~},
  title = {Unveiling Genetic Signatures of Immune Response in Immune-Related Diseases through Single-Cell eQTL Analysis across Diverse Conditions.},
  journal = {Nature Communications},
  year = {2025},
  volume = {16},
  pages = {7134},
  doi = {10.1038/s41467-025-61192-4}
}

@ARTICLE{teufel2024iimr110368,
  author = {Teufel, L.U.~ and Matzaraki, V.~ and Folkman, L.~ and Ter Horst, R.~ and Moorlag, S.J.C.F.M.~ and Mulders-Manders, C.M.~ and Netea, M.G.~ and Krausgruber, T.~ and Joosten, L.A.B.~ and Arts, R.J.W.~},
  title = {Insights into the Multifaceted Role of Interleukin-37 on Human Immune Cell Regulation.},
  journal = {Clinical Immunology},
  year = {2024},
  volume = {268},
  pages = {110368},
  issn = {1521-7035 1521-6616},
  doi = {10.1016/j.clim.2024.110368},
  keywords = {Inflammation;Autoinflammation;BCG;Interleukin (IL)-37;Trained immunity}
}

@ARTICLE{schaefer2024gaab108796,
  author = {Schaefer, M.~ and Reichl, S.~ and Ter Horst, R.~ and Nicolas, A.M.~ and Krausgruber, T.~ and Piras, F.~ and Stepper, P.~ and Bock, C.~ and Samwald, M.~},
  title = {GPT-4 as a Biomedical Simulator.},
  journal = {Computers in Biology and Medicine},
  year = {2024},
  volume = {178},
  pages = {108796},
  issn = {1879-0534 0010-4825},
  doi = {10.1016/j.compbiomed.2024.108796},
  keywords = {Artificial intelligence;Computational biology;Large language models;Biomedical simulation;GPT-4}
}

@ARTICLE{moorlag2024maia171187e14,
  author = {Moorlag, S.J.C.F.M.~ and Folkman, L.~ and Ter Horst, R.~ and Krausgruber, T.~ and Barreca, D.~ and Schuster, L.C.~ and Fife, V.~ and Matzaraki, V.~ and Li, W.~ and Reichl, S.~ and Mourits, V.P.~ and Koeken, V.A.C.M.~ and de Bree, L.C.J.~ and Dijkstra, H.~ and Lemmers, H.~ and van Cranenbroek, B.~ and van Rijssen, E.~ and Koenen, H.J.P.M.~ and Joosten, I.~ and Xu, C.-J.~ and Li, Y.~ and Joosten, L.A.B.~ and van Crevel, R.~ and Netea, M.G.~ and Bock, C.~},
  title = {Multi-Omics Analysis of Innate and Adaptive Responses to BCG Vaccination Reveals Epigenetic Cell States That Predict Trained Immunity.},
  journal = {Immunity},
  year = {2024},
  volume = {57},
  number = {1},
  pages = {171--187.e14},
  doi = {10.1016/j.immuni.2023.12.005}
}

@ARTICLE{vos20222sdm982746,
  author = {Vos, W.A.J.W.~ and Groenendijk, A.L.~ and Blaauw, M.J.T.~ and van Eekeren, L.E.~ and Navas, A.~ and Cleophas, M.C.P.~ and Vadaq, N.~ and Matzaraki, V.~ and Dos Santos, J.C.~ and Meeder, E.M.G.~ and Fr{\"o}berg, J.~ and Weijers, G.~ and Zhang, Y.~ and Fu, J.~ and Ter Horst, R.~ and Bock, C.~ and Knoll, R.~ and Aschenbrenner, A.C.~ and Schultze, J.~ and Vanderkerckhove, L.~ and Hwandih, T.~ and Wonderlich, E.R.~ and Vemula, S.V.~ and van der Kolk, M.~ and de Vet, S.C.P.~ and Blok, W.L.~ and Brinkman, K.~ and Rokx, C.~ and Schellekens, A.F.A.~ and de Mast, Q.~ and Joosten, L.A.B.~ and Berrevoets, M.A.H.~ and Stalenhoef, J.E.~ and Verbon, A.~ and van Lunzen, J.~ and Netea, M.G.~ and van der Ven, A.J.A.M.~},
  title = {The 2000HIV Study: Design, Multi-Omics Methods and Participant Characteristics.},
  journal = {Frontiers in Immunology},
  year = {2022},
  volume = {13},
  pages = {982746},
  issn = {1664-3224},
  doi = {10.3389/fimmu.2022.982746},
  keywords = {COVID-19;HIV-1;cardiovascular disease;hepatic disease;HIV extreme phenotype;HIV reservoir;multi-omics;non-AIDS comorbidities}
}